Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901283.1_cds_XP_016451312.1_45680
CDS Infomation

[gene=LOC107776016] [db_xref=GeneID:107776016] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like isoform X1] [protein_id=XP_016451312.1] [location=join(39577..39610,40007..40268,40388..40487,40580..40846,41022..41099,41187..41288,41375..41424,41592..41691,41806..41901,41987..42085,42264..42387,42501..42895,42978..43064)] [gbkey=CDS]
Sequence

ATGTCAGGACCTCTTGAACGACCAGTCAGGCCAAGTATGGAAAATATTGATATTGAAAAT
ACTGAGGAGGAGAGGAAGCCAAGGCTTGGGTCATTCAAGAAAAAGGCACTTAATGCCTCC
AACAAATTCAGACAGTCTCTTAAAAAAACTGGCCGGAGAAACAGTAGAGTCATGTCTGTT
GTCTTCGAGGATGAGCATGACGCGGAGGAATCAAAGGCAGTTGATGCCTTCCGTCAAGCA
CTTATCCTGGAGGAATTACTTCCTGCTAAACATGATGATTATCATATGATGCTAAGGTTT
TTGAAGGCCAGAAAATTTGATTTAGAGAAAACAAAGCAGATGTGGTCTGATATGCTTAAT
TGGAGGAAGGAATTTGGTGCAGACACTATCATGGAGGACTTTGAGTTCAAAGAAAAGGAG
GAGGTCGTCAAGTACTATCCTCAAGGGCATCACGGAGTTGACAAAGATGGAAGACCAGTA
TATATCGAAAGAATTGGTCAAGTAGATTCTACCAAGCTCTTGCAAGTCACAACAATGGAC
CGTTATCTCAAGTACCACGTGCAAGAGTTCGAGAGGACTTTCAATGACAAATTGCCAGCT
TGCTCTATTGCAGCCAAAAAGCATATTGATACAAGCACAACTATTTTGGATGTACAAGGA
GTGGGACTTAAGAATTTCAACAAATCAGCAAGGGATCTCCTTCAATGCATCCAAGGTGTG
GATGGTAACAATTATCCTGAGAGCTTGTGTCGTATGTATATCATCAATGCTGGTTCTGGA
TTCAGGCTTTTGTGGAACTCTGTCAAGTCATTCCTTGACCCCAAGACGACTGCAAAGATC
AACGTTCTTGGTAACAAATACCAGAGCAAATTGCTTGAAATAATTGATGGCAGTGAACTT
CCAGAATTCTTAGGTGGTACATGTACTTGTGCCGAAAAAGGAGGATGTATGCTTTCTGAT
AAAGGCCCGTGGAATGATCCAGAAATAATGAAGATGGTTCACAGTGGCATGCATAAATGC
TCAAAGAAAAGTGCCAGTCCCACAGTTGATGAGAAAACAATTTCCGAGGATGGCAATGCT
AATCCGAAGGAAGCAAAGAAGAGCAATTCCATTAAAATGAGAACTGCCTCTTCCAAAGTC
CAAAGGGAACATGCATCTCATATGCAGCTCTCTACTGTCCATGAGGAAGTTGAAGTAAAG
AAAAACCTCCCTAGTGCATATGATTCTGATAAGTATATCCCTGTGGTGGACAAAGTAATT
GATTCAACTATGCCTAATGCTACAAAAGCCGACAACTATGCCATTGCAAAAGCCTCAGAT
TTCTTACCCATGCACGATATTTCTAAGTCACCCGAAGGATTTAGCAACCACCTTTTCACT
GGAGTGATGACATTCGTGATGGGGGTCGTGACAATGGTCCGAATGACACGCAATATGCCA
AGAAAGCTTACGGATTCGACCCTCTTGTCAGGTTCCCTAAAGGCCGTTGACATGGTTAAA
CCACAAGCTCAAGAATATCGTTTGAATGGATCTGCCATCTCGAATAATGAGTACTTCAGC
ATGATGAAACGGATGGGAGAGCTCGAGGAGAAGGTCATTACTCTTAGCAACAAGCCTAGT
GCCTTACCACCTGAGAAAGAGGAAATGCTCAACAATGTCATGAGTCATGTTGATAAATTG
GAACAAGAGCTTTGTGCAACCAAGATGGCACTCGAGAAAGCTCTTGCTCGTCAAGAGGAG
CTCTTAGCCTACATTGAGAAGAAGAAGAAAAAGAAGAACTTCTTTGGTTTCTAA

Peptide Sequence

PEP ID

XP_016451312.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like isoform X1 [Nicotiana tabacum]
Sequence

MSGPLERPVRPSMENIDIENTEEERKPRLGSFKKKALNASNKFRQSLKKTGRRNSRVMSV
VFEDEHDAEESKAVDAFRQALILEELLPAKHDDYHMMLRFLKARKFDLEKTKQMWSDMLN
WRKEFGADTIMEDFEFKEKEEVVKYYPQGHHGVDKDGRPVYIERIGQVDSTKLLQVTTMD
RYLKYHVQEFERTFNDKLPACSIAAKKHIDTSTTILDVQGVGLKNFNKSARDLLQCIQGV
DGNNYPESLCRMYIINAGSGFRLLWNSVKSFLDPKTTAKINVLGNKYQSKLLEIIDGSEL
PEFLGGTCTCAEKGGCMLSDKGPWNDPEIMKMVHSGMHKCSKKSASPTVDEKTISEDGNA
NPKEAKKSNSIKMRTASSKVQREHASHMQLSTVHEEVEVKKNLPSAYDSDKYIPVVDKVI
DSTMPNATKADNYAIAKASDFLPMHDISKSPEGFSNHLFTGVMTFVMGVVTMVRMTRNMP
RKLTDSTLLSGSLKAVDMVKPQAQEYRLNGSAISNNEYFSMMKRMGELEEKVITLSNKPS
ALPPEKEEMLNNVMSHVDKLEQELCATKMALEKALARQEELLAYIEKKKKKKNFFGF

Transcript Sequence

Gene sequence data has not been registered.